{ "softwareVersion": "233.230615.567", "startDateTime": "2024-05-09T09:24:07-07:00", "userId": "Local User", "experimentId": "202405090924_1344856294_VMSC01601", "experimentName": "1344856294", "experimentDescription": "735467.48 (1344856294), 735467.51 (1344856303), 735467.54 (1344856312)\nMouse\nCM1413", "experimentDirectory": "D:\\MERSCOPEDATA\\202405090924_1344856294_VMSC01601", "codebookName": "codebook_0_CM1413-allen-mouse-p0_CM1413-allen-mouse-p0.csv", "codebookId": "CM1413-allen-mouse-p0", "panelName": "CM1413-allen-mouse-p0", "sampleThickness": "10", "additionalStains": [ "DAPI - Protein (Medium)", "PolyT - Protein (Medium)" ], "fiducialColor": "488", "usedReadouts": [ "V0001T8B1", "V0002T8B1", "V0003T8B1", "V0004T8B1", "V0005T8B1", "V0006T8B1", "V0007T8B1", "V0008T8B1", "V0009T8B1", "V0010T8B1", "V0011T8B1", "V0012T8B1", "V0013T8B1", "V0014T8B1", "V0015T8B1", "V0016T8B1", "V0017T8B1", "V0018T8B1", "V0019T8B1", "V0154T8B1", "V0021T8B1", "V0022T8B1", "V0023T8B1", "V0024T8B1", "V0025T8B1", "DAPI", "PolyT" ], "usedHybridizationBuffers": [ "1", "3", "7", "9", "11", "15", "17", "19", "21" ], "cartridgeBarcode": "0010142202406130013243", "regionSummaries": [ { "name": "1344856312", "startIndex": 0, "endIndex": 545 }, { "name": "1344856303", "startIndex": 546, "endIndex": 1052 }, { "name": "1344856294", "startIndex": 1053, "endIndex": 1563 } ], "measurementStartDateTime": "2024-05-09T10:12:51-07:00", "endDateTime": "2024-05-10T08:45:38-07:00", "fovCount": 1564, "runMode": "Experiment", "cell_metrics": [ { "region_id": 0, "metrics": { "num_cells": 267463, "volume_stats": { "min": 8.748163356887671, "pct_5": 14.133200854685294, "pct_25": 44.20911945463313, "pct_50": 106.900411570423, "pct_75": 261.63523888683005, "pct_95": 1033.685827187997, "max": 27951.31492005411, "mean": 246.6648105241528 }, "transcript_count_stats": { "min": 0.0, "pct_5": 0.0, "pct_25": 0.0, "pct_50": 0.0, "pct_75": 73.0, "pct_95": 856.0, "max": 13548.0, "mean": 135.83814209815938 }, "ratio_covered": 0.27442794962323475, "ratio_transcripts_within_cell": 0.43758417807189487, "num_cells_with_no_transcripts": 147298, "enrichment": { "Neurod6": 0.4044665012406948, "Nr2f2": 0.35230123016794074, "Mef2c": 0.4041941970698075, "Nfib": 0.3003909663768916, "Nfix": 0.25100558951052604, "Zeb2": 0.35957399853348426, "Tcf7l2": 0.423431980790984, "Id4": 0.4031990123525873, "Zic1": 0.24931394836437337, "Neurod2": 0.30802824238796706, "Sox5": 0.4656493037475014, "Tbr1": 0.48132885310340456, "Bhlhe22": 0.28623514216111046, "Nr2f1": 0.33704256051393827, "Foxg1": 0.5350619854263272, "Bcl11b": 0.42497998223080213, "Sox2": 0.40357191529100567, "Satb1": 0.41068671602023754, "Pou3f3": 0.4239423864514715, "Zic2": 0.29388340527709805, "Nr4a3": 0.4539916087131444, "Dlx1": 0.5545722713864307, "Etv5": 0.3514068741970979, "Arx": 0.5306864064602961, "Satb2": 0.42053802117635136, "Jun": 0.422623132052455, "Tox": 0.5014803870613587, "Rxrg": 0.38436859700204895, "Tshz2": 0.35505585792036665, "Tfap2b": 0.3928446332689114, "Pbx3": 0.41993703429218154, "Nr4a2": 0.5019471581562427, "Isl1": 0.5323741007194245, "Tfap2d": 0.4485516645049719, "Zfhx3": 0.43073037820732324, "Zfp521": 0.41824630569225324, "Foxp2": 0.4490640741191224, "Nhlh2": 0.3160519241723211, "Lhx2": 0.45488526883146635, "Zhx2": 0.40062945330223343, "Pax6": 0.2565852009885723, "Olig1": 0.2815713625920058, "Shox2": 0.4123358718487395, "Lhx6": 0.441561203871105, "Tox3": 0.4215734618401883, "Zfhx4": 0.5265945502272674, "Prox1": 0.4564294207576015, "Meis1": 0.372555653291833, "Gbx2": 0.5248662571824847, "En1": 0.459622667065483, "Eomes": 0.3803003189916751, "Olig2": 0.4913162261792662, "Etv1": 0.3505121916029433, "Fosl2": 0.4249627693950378, "Sall3": 0.47136275020637086, "Insm1": 0.17277070063694266, "Sp9": 0.4825841316629821, "Foxp4": 0.4247322428359381, "Zfp536": 0.4232564254256228, "Plagl1": 0.44613425925925926, "Irx2": 0.4743322352048918, "St18": 0.3072597226859744, "Sox21": 0.40463443818076406, "Tox2": 0.46969731718168767, "Rarb": 0.49886373697724523, "Ets1": 0.47648960175641886, "Otx2": 0.49710299762021853, "Sox6": 0.4909631893206811, "Lef1": 0.49488035501633604, "Zbtb16": 0.5265827848285393, "Irx1": 0.443530769913862, "En2": 0.42785841224227433, "Nr3c2": 0.6059969542614084, "Sp8": 0.511118170266836, "Tfap2a": 0.38969378964680085, "Bcl6": 0.49563176424566435, "Lhx1": 0.421364308265051, "Nr2e1": 0.4143668191137045, "Hoxa5": 0.6903149339654588, "Uncx": 0.3771629499398538, "Pax3": 0.47416843595187547, "Gata3": 0.4897966376484686, "Dlx2": 0.5314000738825267, "Otp": 0.4906724024011359, "Six3": 0.4753666950237919, "Lhx5": 0.4801792449921375, "Ebf2": 0.4998069155542567, "Prdm13": 0.506508298080052, "Irx5": 0.44543423164019735, "Onecut1": 0.5388969196001384, "Msx1": 0.38779818450496095, "Barhl1": 0.2772520672471387, "Sox10": 0.5164057145518788, "Sp5": 0.4213752022862652, "Gata2": 0.49091257546235667, "Neurog2": 0.4342743085258055, "Tal1": 0.43633118855256864, "Pou4f2": 0.4455043199165685, "Nkx2-2": 0.4669074842523211, "Tfap2c": 0.4494441855821074, "Nkx2-1": 0.5489972652689152, "Bnc2": 0.44683668001134824, "Lmx1b": 0.41481506231414345, "Ikzf1": 0.4920056960542207, "Thrb": 0.4788050361320122, "Foxb1": 0.38908049336528905, "Prdm16": 0.5066543778801843, "Sim1": 0.505166864306285, "Dmbx1": 0.39246320447916316, "Onecut3": 0.5877520185089004, "Fezf1": 0.4248831394716817, "Glis3": 0.4973092027344318, "Irx3": 0.41783043474076287, "Dbx2": 0.5214851898206091, "Pax7": 0.4472230373706572, "Nkx2-4": 0.55972894482091, "Lmx1a": 0.4953583765112263, "Hoxc4": 0.5896519782982665, "Six6": 0.5235736248718825, "Nhlh1": 0.15581578787694922, "Prdm12": 0.4355779427359491, "Pax8": 0.5984686681442676, "Tlx3": 0.4870766488413547, "Gbx1": 0.4833887043189369, "Pax2": 0.4450780241698932, "Atoh1": 0.19524294937138975, "Mkx": 0.5516779379864745, "Sox14": 0.5510742046058031, "Insm2": 0.495036013237298, "Foxa1": 0.505713398004626, "Pitx2": 0.43873054827374647, "Nr5a2": 0.5461518628335696, "Evx2": 0.422625467927162, "Hmx3": 0.4383717158611742, "Hoxc5": 0.5345293418350805, "Nkx6-2": 0.39172605597079785, "Runx2": 0.4669759350536387, "Barx2": 0.4754134672179563, "Foxd3": 0.5418874409279679, "Hmx2": 0.5295114374470489, "Prdm6": 0.40959442558513487, "Hoxb6": 0.45569008495701274, "Lhx8": 0.4499170468685193, "Lhx3": 0.4128868164476473, "Lhx4": 0.4418229777256741, "Cux2": 0.4556828716881089, "Fezf2": 0.4654638624959966, "Mafa": 0.4441509625641286, "Phox2b": 0.4252022487316605, "Rax": 0.6022899114279542, "Tbx20": 0.466276191051265, "Ascl1": 0.42439550949913646, "Slc18a3": 0.44889167384663586, "Slc6a3": 0.5180171758341747, "Slc6a4": 0.4299071058028713, "Slc6a5": 0.4887766554433221, "Slc32a1": 0.4930323378855707, "Slc17a6": 0.5028947607397005, "Slc17a7": 0.40036025217652355, "Slc17a8": 0.48398802503855576, "Slc6a2": 0.5268888155724183, "Cacng4": 0.38088469521089324, "Gja1": 0.3486181913875375, "Gabbr2": 0.4169775327261528, "Sst": 0.4916590250182936, "Nts": 0.5331605098293368, "Grin2b": 0.5645318774012769, "Cck": 0.4736566643405443, "Penk": 0.5472098681253971, "Kcnma1": 0.5513119204380423, "Cbln2": 0.5010045338731901, "Grik3": 0.5349267879282474, "Adgrg1": 0.4337813795908713, "Cnr1": 0.45097391668836573, "Adgrl3": 0.5387290480065093, "Cbln1": 0.35315227993546366, "Fxyd7": 0.3853329333205494, "Fzd1": 0.43223947596724, "Cxcr4": 0.38629172599272266, "Gpr17": 0.6145480885618704, "Nxph4": 0.47920354301980306, "Slc24a2": 0.5631868131868132, "Igf1": 0.4392849587476201, "Kcnb2": 0.530227004695386, "Sstr2": 0.31830021742406306, "Prokr2": 0.5029442643903775, "Chrm3": 0.5305016538390178, "Lpar1": 0.28913283303596965, "Kcnj6": 0.4602663189354857, "Kcnc4": 0.41984719368225953, "Kcnj2": 0.5797229013854931, "Cacng5": 0.5015493108238059, "Htr7": 0.4848380458530129, "Grm1": 0.5433879565235498, "Npy1r": 0.5199699824897857, "Kcnn2": 0.6069971790179933, "Tacr3": 0.5439281530652089, "Trpc4": 0.6243705767334014, "Kcnh5": 0.611619639698432, "Ackr3": 0.527331857182397, "Adcyap1": 0.541812637484142, "Agt": 0.34517268714037747, "Grik4": 0.5895244621813736, "Grp": 0.5193965054052312, "Kcnh1": 0.5839650257577114, "Hcrtr2": 0.5263120134878215, "Nxph2": 0.5150675898450379, "Stmn3": 0.41527248158631525, "Crmp1": 0.42264311836130575, "Dcx": 0.39390025900960823, "Vim": 0.2616231900534328, "Slc1a3": 0.3027787854906033, "Ppp1r1b": 0.3954108191396327, "Islr2": 0.34523788056382054, "Fn1": 0.5000468603561387, "Prkcb": 0.41434690178912975, "Serpine2": 0.28525551853169856, "Olfm3": 0.5215890328713664, "Robo2": 0.4785788157424644, "Efnb2": 0.43539017341040465, "Shisa6": 0.5273985398942286, "Ntrk2": 0.4126435223010649, "Sparc": 0.2397544297124648, "Ephb1": 0.4812469629203566, "Tnc": 0.4641899179499342, "Ccnd2": 0.2632334329292956, "Dtx1": 0.41526149375224725, "Nrp1": 0.5754660560805154, "Aldoc": 0.27831219825977477, "Shtn1": 0.47068954428190635, "Ptprn2": 0.546962843591481, "Vstm2l": 0.442321376072127, "Pla2g7": 0.3857919365715103, "Klhl13": 0.37580926402292697, "Fat4": 0.4929759987731002, "Pou3f2": 0.4677968894354967, "Fat1": 0.4844167990241695, "Zfp462": 0.4782881669913296, "Pcdh10": 0.47437336043296385, "Dusp4": 0.41627224477052766, "Sema3a": 0.418015707645456, "Luzp2": 0.381313482859792, "Calb2": 0.4373559237346839, "H19": 0.2543197479137089, "Cdh4": 0.4970777664425571, "Dab1": 0.4567235707205972, "Lmo3": 0.42094809019718266, "Runx1t1": 0.4486647387209881, "Mpped2": 0.4481437432789477, "Mpped1": 0.42179500697055966, "Hs6st2": 0.4971172580153481, "Gng4": 0.34982995533465705, "Gad2": 0.475642683787725, "Nrgn": 0.32180875481398796, "Hs6st3": 0.449335216480787, "Resp18": 0.4925949925442466, "Ptprt": 0.5035950117603463, "Nrp2": 0.5276563445433812, "Cldn5": 0.5240773815633704, "Ralyl": 0.45133951692640895, "Vat1l": 0.4284764101341972, "Sema3c": 0.48140056478135057, "Slc4a4": 0.3232143084477848, "Spon1": 0.5110481406011207, "Mdk": 0.3128988280041701, "Ptgds": 0.36446663419386266, "Gad1": 0.4634726040375097, "Nrcam": 0.503741266814322, "Sla": 0.40611742368054116, "Cxxc5": 0.35307765317959716, "Dpy19l1": 0.4947198713719596, "Sez6l": 0.5011990213524572, "Nefm": 0.38617994993824467, "Camk1": 0.46489748372024925, "Pde1a": 0.49408521878947975, "Abca1": 0.45749716990840794, "Cachd1": 0.511655467000052, "Cd9": 0.3751948362419316, "Cdh8": 0.5313597550934462, "Pcdh11x": 0.35327170846496875, "Aldh1l1": 0.28026316945266727, "Igsf21": 0.42808879375374753, "Efna5": 0.44826002067302173, "Dkk3": 0.4425553194149269, "Nrn1": 0.434696349511319, "Mki67": 0.32077764277035237, "Pdgfra": 0.5252633045825266, "Crym": 0.3897269347463784, "Dach1": 0.43847041903513323, "Clstn2": 0.5139381897919872, "Pcdh8": 0.4767817927730086, "Tbc1d30": 0.4861861824718508, "Lhfpl3": 0.46408144412031854, "Spock3": 0.48516022348608223, "Gda": 0.436940845150554, "AI593442": 0.45758814832140204, "Prmt8": 0.41671587310107894, "Pcsk2": 0.5471090957487261, "Nos1": 0.4028174581783552, "Pid1": 0.42331389229959654, "Ntng2": 0.377369591448031, "Thsd7a": 0.5010625374283515, "Rgs10": 0.38512832329982427, "Nell1": 0.5783819977976434, "Tnr": 0.5934473708027875, "Unc5c": 0.44548512883247954, "Tgfb2": 0.41015272217504417, "Rgs8": 0.39792722333517333, "Lamc1": 0.4550782288686329, "Cntnap4": 0.5925563713689617, "Tspan9": 0.36995991282011365, "Dok5": 0.45611987017485345, "Peg10": 0.4569778926457381, "St6galnac5": 0.5206757800571233, "Sox2ot": 0.5814101511169514, "Shisa9": 0.49206497868492444, "Spats2l": 0.4847040744176922, "Adamts3": 0.5455036120567964, "Cdh12": 0.5336455281552054, "Mab21l1": 0.38156060835196454, "Unc13c": 0.37999375405385927, "Gpc4": 0.3955732852914683, "Sulf1": 0.5159137577002053, "Elmo1": 0.4344653832821839, "Brinp3": 0.5646604456121992, "Rprm": 0.3972563332674086, "Tspan18": 0.4942678917643092, "Ildr2": 0.44425409852393377, "Mlc1": 0.29047803386734955, "Tppp3": 0.4005655415158886, "Mir100hg": 0.7043755265374895, "Wnt7b": 0.3618698110937312, "Mdga1": 0.3885765426715928, "Cpne4": 0.4606679319572316, "B230209E15Rik": 0.45977482387539964, "Chd7": 0.4204740215741053, "Cadps2": 0.3462381022529094, "Dusp6": 0.47478576820659163, "Smoc1": 0.4529389426858708, "Ccna2": 0.30854443967367967, "Lifr": 0.468799164099002, "Tafa2": 0.43834784145640937, "Tmem163": 0.5125645300604624, "Arhgap29": 0.43667849875985804, "Hist1h1d": 0.5426008968609866, "Ntng1": 0.626742477240395, "Tmem164": 0.400924784619097, "Samd5": 0.5462374161800634, "Lrrtm3": 0.5621605527295686, "Dscaml1": 0.6304152672714147, "Sfrp2": 0.45485535181139114, "Pdzrn3": 0.3693383839557528, "Creg2": 0.4539859102706711, "Fam210b": 0.3687732247066185, "Gpc3": 0.4352394442719652, "Dock4": 0.5707006593406594, "Plce1": 0.42469767667145647, "Cyb561": 0.46389483702117534, "Rftn1": 0.44744375589384344, "Sema5a": 0.5339534788943341, "Jam2": 0.40691621094342295, "Kirrel3": 0.5773836612100014, "Pcbd1": 0.37981201113034335, "Tafa1": 0.5261250594261009, "Egfr": 0.4413100007027901, "Fbln2": 0.5158863774760898, "Kcnk9": 0.504535559344246, "Kif11": 0.33992094861660077, "Pmepa1": 0.489604494957814, "Dio2": 0.4234793663211422, "Tmem132d": 0.5953584417185478, "Igsf11": 0.6313728827985361, "Sorcs3": 0.5824833362692563, "Mcm3": 0.27944923476705535, "Galnt17": 0.586595825228777, "Slc2a13": 0.5190972412058653, "Tmem200a": 0.5325164250703932, "Myorg": 0.4217807172406524, "Phlda1": 0.4769716344721086, "9130024F11Rik": 0.44467235236964264, "Vstm2b": 0.56609789833164, "Fam135b": 0.5496327261869215, "Tiam2": 0.45210847120288594, "Palmd": 0.5183519481626737, "Fhit": 0.4185878962536023, "Sdk1": 0.614500393820527, "Ccdc80": 0.4261032243864862, "Cntn3": 0.6279988282473207, "Pde1c": 0.3666449613956251, "Cdh9": 0.6041606804206655, "Pclaf": 0.3334463259425895, "Lhfp": 0.3903842026185877, "Tmtc1": 0.5147201289721424, "Lpl": 0.46284619404284966, "Lmo1": 0.42714660975209323, "Dgkg": 0.5345551064462483, "Slc43a2": 0.598256147958711, "Fgfr1": 0.48697412561964265, "Asb4": 0.46841368196903715, "Nbl1": 0.3579689541228003, "Kctd8": 0.49346484621738496, "Iqgap2": 0.49365798023087026, "C1qa": 0.4947974472807991, "Zmat4": 0.4643664582357374, "Synpr": 0.46548406957057104, "Slco1c1": 0.5829884739032316, "Lypd6": 0.46891964074980436, "Dll1": 0.5721270527378696, "Galnt14": 0.6003743309654893, "Rgs6": 0.468418892419014, "Rspo3": 0.5193636173330543, "Mlf1": 0.42225976552500893, "Fam107a": 0.42080208947678827, "Angpt1": 0.4995484919631569, "Pdlim4": 0.32955636313768516, "Sncg": 0.40153511284224996, "Thbs1": 0.4625544308907922, "Prss12": 0.4883067387831309, "Inhbb": 0.47873288052555396, "Ptchd4": 0.6027695973742778, "Rprml": 0.4462482423622651, "C1qc": 0.48629327661585725, "C1ql3": 0.4822571515652893, "Cep112": 0.5953393070124469, "Utrn": 0.4596567480218433, "Rai14": 0.42296718972895864, "Col25a1": 0.5882401917347114, "Hs3st2": 0.46514088646784496, "Naaa": 0.4658952045917423, "Gas2l3": 0.46066333594173237, "Laptm5": 0.5216650697327797, "Parm1": 0.4899783231798149, "Met": 0.46671305961493853, "Slit3": 0.5787007567720489, "Col18a1": 0.44185029335022546, "Ostf1": 0.3731301681687262, "Thsd7b": 0.6502312961480295, "Cenpf": 0.26941832114245906, "Gpc6": 0.5677858880778589, "Ptpru": 0.6018647939181127, "Cspg4": 0.6219686422247095, "Slitrk6": 0.6118617937789064, "Hmmr": 0.4061411839189617, "Mgat4c": 0.5406746975449035, "Fibcd1": 0.43513665065704465, "Syndig1": 0.4615866560413289, "Sdk2": 0.5643075134428135, "Inhba": 0.5719741480611046, "Ung": 0.3593186372745491, "C1ql1": 0.43070065468728236, "Cdca3": 0.3482893284659139, "Eya2": 0.3908608731130151, "Prr16": 0.5727682151890925, "Ecrg4": 0.4411043947067473, "Adamtsl3": 0.4303103216446693, "C230072F16Rik": 0.4324213293895325, "Thrsp": 0.4154558663276426, "Rxfp1": 0.6509000382995022, "Pld5": 0.5370728445705405, "Tshr": 0.5133473832103969, "Dpyd": 0.5287314157477936, "Hs3st3a1": 0.5645905115292871, "Arhgap6": 0.6905728851637432, "Lhx9": 0.47986367322268003, "Frem2": 0.38487086700044615, "Spp1": 0.39841507550230876, "Tbx3": 0.5290873629699374, "Il1rapl2": 0.573261606731695, "Slc26a4": 0.5007789510126364, "Rerg": 0.4832825072564941, "Vsx2": 0.5117837952864819, "Nkx6-1": 0.4454220400948134, "Syt6": 0.49302577241659173, "Pde7b": 0.3790445491652506, "C1qb": 0.4894994651202072, "Ccn3": 0.3901821633593997, "Ccnb1": 0.3651672820857111, "Rassf4": 0.3808684505688191, "Cald1": 0.4107123458413617, "Cdc20": 0.28329587298551, "Pxdc1": 0.45512646915452526, "Irs4": 0.4092434728369026, "Nrsn2": 0.5089123403451614, "Dhrs3": 0.38779469548133594, "Bmp7": 0.45933559916675804, "Cenpa": 0.3617439822597375, "Ecel1": 0.5689459187688541, "Cdh20": 0.48008081318265045, "Slc29a1": 0.3050939687247053, "Vav3": 0.532365723316213, "Rnf112": 0.7008060100979379, "Adcy8": 0.5434141378059935, "Htra1": 0.4067424650967703, "Ndst4": 0.5728641103262697, "Cdca2": 0.41057127602776294, "Crb2": 0.4419196509725504, "Abtb2": 0.4190073379535263, "Pde5a": 0.4281954192833395, "Ankfn1": 0.5180350077743738, "Blank-0": 0.5392615096985277, "Blank-1": 0.4718498659517426, "Blank-2": 0.5247169811320754, "Blank-3": 0.47903397027600847, "Blank-4": 0.5114119922630561, "Blank-5": 0.5101452489189489, "Blank-6": 0.5266490765171504, "Blank-7": 0.5172978027115475, "Blank-8": 0.5165291898458981, "Blank-9": 0.4834173926333486, "Blank-10": 0.5309301290609701, "Blank-11": 0.4655083655083655, "Blank-12": 0.5872270486029585, "Blank-13": 0.5110294117647058, "Blank-14": 0.552054794520548, "Blank-15": 0.554904831625183, "Blank-16": 0.5977653631284916, "Blank-17": 0.5340622371740958, "Blank-18": 0.47357193647783835, "Blank-19": 0.6111893293812524, "Blank-20": 0.5400280898876404, "Blank-21": 0.518396763181186, "Blank-22": 0.5943242284498049, "Blank-23": 0.5016306120230459, "Blank-24": 0.4675496688741722, "Blank-25": 0.5607655502392345, "Blank-26": 0.5456817550680366, "Blank-27": 0.534576067348166, "Blank-28": 0.43182978723404253, "Blank-29": 0.6436941964285714, "Blank-30": 0.5156441181611606, "Blank-31": 0.5558011049723757, "Blank-32": 0.4215225925640828, "Blank-33": 0.5497679216090768, "Blank-34": 0.6142152286971596, "Blank-35": 0.41762114537444933, "Blank-36": 0.5507513467536149, "Blank-37": 0.648350203759695, "Blank-38": 0.5116300450491864, "Blank-39": 0.5823360459550024, "Blank-40": 0.4533199643493761, "Blank-41": 0.4788247213779129, "Blank-42": 0.4344021461420542, "Blank-43": 0.6615331610680448, "Blank-44": 0.6553355689282925, "Blank-45": 0.5340068999507146, "Blank-46": 0.43930868167202575, "Blank-47": 0.6042242896655771, "Blank-48": 0.538569032979318, "Blank-49": 0.5013599274705349 }, "sum_signals_medians": { "PolyT_raw": 18218083.0, "PolyT_high_pass": 172758.3146270847, "DAPI_raw": 6180446.0, "DAPI_high_pass": 91808.99492505271 } } }, { "region_id": 1, "metrics": { "num_cells": 260386, "volume_stats": { "min": 8.747637061080212, "pct_5": 13.423517943990193, "pct_25": 36.453020099937845, "pct_50": 89.44000820578502, "pct_75": 227.25996878469545, "pct_95": 1049.39998899056, "max": 26453.843988473905, "mean": 232.75757336438951 }, "transcript_count_stats": { "min": 0.0, "pct_5": 0.0, "pct_25": 0.0, "pct_50": 1.0, "pct_75": 88.0, "pct_95": 917.0, "max": 26071.0, "mean": 152.22041507607935 }, "ratio_covered": 0.27149608194620023, "ratio_transcripts_within_cell": 0.44963375657213656, "num_cells_with_no_transcripts": 129097, "enrichment": { "Neurod6": 0.4513997024118482, "Nr2f2": 0.3722668469119889, "Mef2c": 0.4123922709229834, "Nfib": 0.3090679864105976, "Nfix": 0.2582544588298362, "Zeb2": 0.37181725331775745, "Tcf7l2": 0.44288642556300684, "Id4": 0.4240406468311384, "Zic1": 0.2253183949133605, "Neurod2": 0.2557889476155139, "Sox5": 0.4798179950095406, "Tbr1": 0.5214642602222902, "Bhlhe22": 0.2918359434264426, "Nr2f1": 0.3466288904329492, "Foxg1": 0.5186649946947044, "Bcl11b": 0.43480153586539166, "Sox2": 0.4032472231394507, "Satb1": 0.43429130431433566, "Pou3f3": 0.4374223430219658, "Zic2": 0.2757092840086166, "Nr4a3": 0.46651390480158317, "Dlx1": 0.5644538110291535, "Etv5": 0.36566842996998206, "Arx": 0.5252210088403536, "Satb2": 0.423533701427232, "Jun": 0.4349305238987658, "Tox": 0.5047166691718022, "Rxrg": 0.4082101035391075, "Tshz2": 0.37263201595653467, "Tfap2b": 0.4012608497729629, "Pbx3": 0.4361816342135955, "Nr4a2": 0.5093413323816781, "Isl1": 0.542869042660796, "Tfap2d": 0.45528344917463076, "Zfhx3": 0.44464989135567856, "Zfp521": 0.4361370502136679, "Foxp2": 0.4643495804484387, "Nhlh2": 0.3299940691216908, "Lhx2": 0.4666024096385542, "Zhx2": 0.41597024589299963, "Pax6": 0.26855436081242534, "Olig1": 0.292409838093036, "Shox2": 0.4183913115386736, "Lhx6": 0.47116907804414404, "Tox3": 0.43633803164877516, "Zfhx4": 0.5254191381598549, "Prox1": 0.48794762854417756, "Meis1": 0.3745702059777747, "Gbx2": 0.5271889400921659, "En1": 0.4844139272042292, "Eomes": 0.4052541729893778, "Olig2": 0.49703150727684287, "Etv1": 0.38727967632194205, "Fosl2": 0.4265466995779919, "Sall3": 0.47323904603438716, "Insm1": 0.18823839369904044, "Sp9": 0.49081073816483556, "Foxp4": 0.42899372209131803, "Zfp536": 0.42980359807358703, "Plagl1": 0.4638444034794631, "Irx2": 0.47308161575667784, "St18": 0.28307065859555364, "Sox21": 0.4080507966934228, "Tox2": 0.47977580283270227, "Rarb": 0.4847029077117573, "Ets1": 0.48078544212028906, "Otx2": 0.4924523891234824, "Sox6": 0.5004938784400533, "Lef1": 0.48969738657982836, "Zbtb16": 0.5351905117005789, "Irx1": 0.44175153442032067, "En2": 0.45523412783091954, "Nr3c2": 0.5989566750753105, "Sp8": 0.5244308717379234, "Tfap2a": 0.383817538593482, "Bcl6": 0.5075904816935441, "Lhx1": 0.4175393191319928, "Nr2e1": 0.41101077774541217, "Hoxa5": 0.6781644855595668, "Uncx": 0.3866282873217323, "Pax3": 0.46803422327595096, "Gata3": 0.5072477538198424, "Dlx2": 0.5383635334088335, "Otp": 0.4617260120891959, "Six3": 0.49566554930329954, "Lhx5": 0.48071875176026585, "Ebf2": 0.5045373681467771, "Prdm13": 0.5019340939137247, "Irx5": 0.4489726186963207, "Onecut1": 0.5417182799504513, "Msx1": 0.3388246061319213, "Barhl1": 0.29018350296543366, "Sox10": 0.5245598118901705, "Sp5": 0.41294750749202463, "Gata2": 0.5152258328223993, "Neurog2": 0.4484962406015038, "Tal1": 0.4535787557430578, "Pou4f2": 0.46088118692936086, "Nkx2-2": 0.4892389481088686, "Tfap2c": 0.47699115044247786, "Nkx2-1": 0.5541147132169576, "Bnc2": 0.4489853948558873, "Lmx1b": 0.44351726012503395, "Ikzf1": 0.4903583524527477, "Thrb": 0.489647657101344, "Foxb1": 0.41120728929384964, "Prdm16": 0.5063979422394426, "Sim1": 0.5440588403313339, "Dmbx1": 0.37756355990059803, "Onecut3": 0.5921895006402048, "Fezf1": 0.4427407342504162, "Glis3": 0.5032460398314057, "Irx3": 0.41903652224124066, "Dbx2": 0.5315502466891716, "Pax7": 0.4224258632312741, "Nkx2-4": 0.5604249667994687, "Lmx1a": 0.4973603314621759, "Hoxc4": 0.5831970821280342, "Six6": 0.5299733917670997, "Nhlh1": 0.14828830414503213, "Prdm12": 0.43937386118933247, "Pax8": 0.6074731472649608, "Tlx3": 0.47932067932067934, "Gbx1": 0.4863597612958227, "Pax2": 0.4134890289690331, "Atoh1": 0.22293867471532447, "Mkx": 0.5489471045374781, "Sox14": 0.5395656260215757, "Insm2": 0.502884111169376, "Foxa1": 0.5001237798840006, "Pitx2": 0.48112316362096486, "Nr5a2": 0.5474131313648227, "Evx2": 0.43451130977380453, "Hmx3": 0.4615294530975524, "Hoxc5": 0.5415686274509804, "Nkx6-2": 0.3954667738643743, "Runx2": 0.5037955465587044, "Barx2": 0.4792088256413604, "Foxd3": 0.5482897384305835, "Hmx2": 0.5365665896843725, "Prdm6": 0.3333333333333333, "Hoxb6": 0.4907755380936112, "Lhx8": 0.47001530541255043, "Lhx3": 0.4190653048591767, "Lhx4": 0.4669513931258898, "Cux2": 0.46727507659930057, "Fezf2": 0.49896743447180303, "Mafa": 0.444233840911511, "Phox2b": 0.46593206631621514, "Rax": 0.5828533451484271, "Tbx20": 0.4940924737184854, "Ascl1": 0.43375638282094203, "Slc18a3": 0.4696586297445691, "Slc6a3": 0.5165048026087806, "Slc6a4": 0.5431555415837088, "Slc6a5": 0.5299329123914759, "Slc32a1": 0.5075663868790927, "Slc17a6": 0.5172850387698464, "Slc17a7": 0.39115258583843854, "Slc17a8": 0.4817211948790896, "Slc6a2": 0.5472645139702191, "Cacng4": 0.39902609932399324, "Gja1": 0.3506499479635178, "Gabbr2": 0.43568999098212485, "Sst": 0.4783108570008079, "Nts": 0.5350754611514813, "Grin2b": 0.565128036704187, "Cck": 0.4664561427083683, "Penk": 0.5509609122987688, "Kcnma1": 0.5526540700360344, "Cbln2": 0.5160973116276651, "Grik3": 0.5487128660832611, "Adgrg1": 0.44004776107740784, "Cnr1": 0.46454746393671476, "Adgrl3": 0.5507612519713696, "Cbln1": 0.3618472894791786, "Fxyd7": 0.40420694439521376, "Fzd1": 0.4451576460922255, "Cxcr4": 0.4077266498696017, "Gpr17": 0.6231540199405099, "Nxph4": 0.49745257955305855, "Slc24a2": 0.5675029868578255, "Igf1": 0.44834650278021654, "Kcnb2": 0.536951376208832, "Sstr2": 0.3384692172478896, "Prokr2": 0.508683494002502, "Chrm3": 0.5387170843714886, "Lpar1": 0.2846677969354787, "Kcnj6": 0.47569605333597254, "Kcnc4": 0.4412317969517063, "Kcnj2": 0.575665262969268, "Cacng5": 0.5129944380918547, "Htr7": 0.5057812138406288, "Grm1": 0.5481420368922038, "Npy1r": 0.5097834688151931, "Kcnn2": 0.601948936403609, "Tacr3": 0.5503711241470131, "Trpc4": 0.6179545024023145, "Kcnh5": 0.5986631457336195, "Ackr3": 0.5285797061931218, "Adcyap1": 0.5559665047468972, "Agt": 0.3534887810883297, "Grik4": 0.5939920765244144, "Grp": 0.5206658074821658, "Kcnh1": 0.5885949572744974, "Hcrtr2": 0.5341570043717925, "Nxph2": 0.522709404293922, "Stmn3": 0.4344599084252406, "Crmp1": 0.4417676056360252, "Dcx": 0.40406430924155146, "Vim": 0.2582944309111993, "Slc1a3": 0.30717095625442137, "Ppp1r1b": 0.38736926790024134, "Islr2": 0.37361391628054336, "Fn1": 0.5047329880335775, "Prkcb": 0.432988298829883, "Serpine2": 0.3010118688392677, "Olfm3": 0.5177081401817171, "Robo2": 0.483155236604219, "Efnb2": 0.426523993842751, "Shisa6": 0.5222138169327963, "Ntrk2": 0.4307347951149195, "Sparc": 0.25365288954763016, "Ephb1": 0.4924883273825872, "Tnc": 0.4632464592753157, "Ccnd2": 0.2586831996765281, "Dtx1": 0.430143098415417, "Nrp1": 0.5658520304097905, "Aldoc": 0.3028198944139771, "Shtn1": 0.4850806820735168, "Ptprn2": 0.5641904717631654, "Vstm2l": 0.4505959289349165, "Pla2g7": 0.3943776354833672, "Klhl13": 0.39659784121801367, "Fat4": 0.4823609102392765, "Pou3f2": 0.47201869510562355, "Fat1": 0.500954618240687, "Zfp462": 0.4848853488946669, "Pcdh10": 0.48673152999037744, "Dusp4": 0.4178992633241489, "Sema3a": 0.4059639126305793, "Luzp2": 0.3874586346674177, "Calb2": 0.4551210166099257, "H19": 0.22099487496628267, "Cdh4": 0.5132252959632106, "Dab1": 0.46480233924162234, "Lmo3": 0.42412554358101723, "Runx1t1": 0.45382776505173517, "Mpped2": 0.45570854624175994, "Mpped1": 0.4400591909902573, "Hs6st2": 0.5261173255048843, "Gng4": 0.3698537555351977, "Gad2": 0.48315248743235445, "Nrgn": 0.33428648175587267, "Hs6st3": 0.4763607025915897, "Resp18": 0.5009381435435893, "Ptprt": 0.5143320537963213, "Nrp2": 0.5253305095623155, "Cldn5": 0.5164773820981713, "Ralyl": 0.4687617809554761, "Vat1l": 0.45145140923196475, "Sema3c": 0.5005929154208686, "Slc4a4": 0.3350117183385415, "Spon1": 0.5161658399267549, "Mdk": 0.3026838744250435, "Ptgds": 0.19359394259552737, "Gad1": 0.46576662947071734, "Nrcam": 0.5117357238170185, "Sla": 0.4253656959672423, "Cxxc5": 0.35975224255307453, "Dpy19l1": 0.4958242204035558, "Sez6l": 0.5187798361958911, "Nefm": 0.410995217519521, "Camk1": 0.47807247746013976, "Pde1a": 0.5040625940415288, "Abca1": 0.4555411133088443, "Cachd1": 0.5181432099344779, "Cd9": 0.38538084306246595, "Cdh8": 0.5340855542174983, "Pcdh11x": 0.3710830507473874, "Aldh1l1": 0.2888790367906053, "Igsf21": 0.44582655034714974, "Efna5": 0.45159869853462825, "Dkk3": 0.4714834010945243, "Nrn1": 0.4627014566483178, "Mki67": 0.3294011734392947, "Pdgfra": 0.5245149827938214, "Crym": 0.4051309460181721, "Dach1": 0.44475511723676814, "Clstn2": 0.5365130540275539, "Pcdh8": 0.4837895214147327, "Tbc1d30": 0.5013594742084476, "Lhfpl3": 0.4804972281639269, "Spock3": 0.5144432411656396, "Gda": 0.45117287658788885, "AI593442": 0.46539423718253764, "Prmt8": 0.4220713004777142, "Pcsk2": 0.5465555399796947, "Nos1": 0.42306488543331083, "Pid1": 0.43789215713090046, "Ntng2": 0.3950525404670803, "Thsd7a": 0.5070803865907487, "Rgs10": 0.39709049588414835, "Nell1": 0.5880224165502139, "Tnr": 0.5913002842789828, "Unc5c": 0.44776684069694656, "Tgfb2": 0.42765105788169516, "Rgs8": 0.40362550254342394, "Lamc1": 0.4474978592906785, "Cntnap4": 0.5942129019573393, "Tspan9": 0.37896469303868136, "Dok5": 0.46320335058921464, "Peg10": 0.48531094720210277, "St6galnac5": 0.5283686255848997, "Sox2ot": 0.5916764466913425, "Shisa9": 0.5033300189482768, "Spats2l": 0.4964820228852446, "Adamts3": 0.5227109543283489, "Cdh12": 0.5381143274444911, "Mab21l1": 0.3911494597595869, "Unc13c": 0.4041813552683118, "Gpc4": 0.4136530500663907, "Sulf1": 0.5099682086935853, "Elmo1": 0.4468316736575838, "Brinp3": 0.5813294955074099, "Rprm": 0.42296528503425057, "Tspan18": 0.5038298478748797, "Ildr2": 0.4551451187335092, "Mlc1": 0.30423646242410574, "Tppp3": 0.4246713768626119, "Mir100hg": 0.7167087522035351, "Wnt7b": 0.3705363631958913, "Mdga1": 0.4058009432607663, "Cpne4": 0.4654130623052649, "B230209E15Rik": 0.5005767821789895, "Chd7": 0.43313179161442905, "Cadps2": 0.35368530084402466, "Dusp6": 0.48082765678467493, "Smoc1": 0.4657785030302292, "Ccna2": 0.3378199245436933, "Lifr": 0.47323968607135347, "Tafa2": 0.45575048934024814, "Tmem163": 0.534306324918271, "Arhgap29": 0.41021528759378056, "Hist1h1d": 0.5163518466309558, "Ntng1": 0.6216840066657658, "Tmem164": 0.41837220080987464, "Samd5": 0.5570373975825423, "Lrrtm3": 0.5693201428743428, "Dscaml1": 0.6391598548609468, "Sfrp2": 0.4684825760917512, "Pdzrn3": 0.38533097649964876, "Creg2": 0.4709522391868328, "Fam210b": 0.38297293460774107, "Gpc3": 0.448301006270964, "Dock4": 0.5737425404944586, "Plce1": 0.43516412601226123, "Cyb561": 0.4808662353096527, "Rftn1": 0.45640498404124724, "Sema5a": 0.5437637796765739, "Jam2": 0.4247735307708013, "Kirrel3": 0.576074624984243, "Pcbd1": 0.39929315476190474, "Tafa1": 0.5436111298710069, "Egfr": 0.4430240605789195, "Fbln2": 0.5048330529497306, "Kcnk9": 0.5253226195632898, "Kif11": 0.3566752534682013, "Pmepa1": 0.5017048102632031, "Dio2": 0.4301190316972048, "Tmem132d": 0.5888731606724686, "Igsf11": 0.616240796881767, "Sorcs3": 0.5934648250091045, "Mcm3": 0.2909149266842354, "Galnt17": 0.5852616241137837, "Slc2a13": 0.523897604304734, "Tmem200a": 0.5382400151071665, "Myorg": 0.42214744570204954, "Phlda1": 0.4713137363070376, "9130024F11Rik": 0.46636462129419876, "Vstm2b": 0.5761445049338327, "Fam135b": 0.5626512532411408, "Tiam2": 0.46094313137827686, "Palmd": 0.5261113343666877, "Fhit": 0.4305352891482989, "Sdk1": 0.6073631923286839, "Ccdc80": 0.40413229716468185, "Cntn3": 0.621537106364237, "Pde1c": 0.37533310238234824, "Cdh9": 0.6024948578700484, "Pclaf": 0.3820423880323335, "Lhfp": 0.39777727716452654, "Tmtc1": 0.5171147114113576, "Lpl": 0.4878854625550661, "Lmo1": 0.42873863823405695, "Dgkg": 0.5444807278492959, "Slc43a2": 0.5960411808202036, "Fgfr1": 0.5024705060957052, "Asb4": 0.512012555837257, "Nbl1": 0.329599026714655, "Kctd8": 0.49429751825666984, "Iqgap2": 0.5050628462401044, "C1qa": 0.504454827756334, "Zmat4": 0.4812382069457902, "Synpr": 0.4874681787887727, "Slco1c1": 0.582807274454317, "Lypd6": 0.48147105667838314, "Dll1": 0.5856890307742478, "Galnt14": 0.5810518061069451, "Rgs6": 0.4796687038879485, "Rspo3": 0.5307512650836902, "Mlf1": 0.4451849705399401, "Fam107a": 0.43817268596029657, "Angpt1": 0.5016767270288397, "Pdlim4": 0.3453451352202358, "Sncg": 0.42878448918717377, "Thbs1": 0.46220555490448845, "Prss12": 0.5054011843560877, "Inhbb": 0.49239785950904613, "Ptchd4": 0.5975287037432242, "Rprml": 0.45288326300984527, "C1qc": 0.4989580866682453, "C1ql3": 0.4980552239380753, "Cep112": 0.5924797620069224, "Utrn": 0.4554502483672708, "Rai14": 0.4252856475385465, "Col25a1": 0.5884730267711561, "Hs3st2": 0.47453629818775045, "Naaa": 0.47222318850662676, "Gas2l3": 0.4444303957516753, "Laptm5": 0.5251294125794221, "Parm1": 0.5087943334865744, "Met": 0.4878578071716441, "Slit3": 0.5848017244328874, "Col18a1": 0.4289447808311339, "Ostf1": 0.38165546835300096, "Thsd7b": 0.6416472814026404, "Cenpf": 0.27095464021278126, "Gpc6": 0.5615169068475088, "Ptpru": 0.6096395356730704, "Cspg4": 0.6306080879383308, "Slitrk6": 0.6064601467827274, "Hmmr": 0.41597055075746847, "Mgat4c": 0.5377102924682944, "Fibcd1": 0.44982240810407514, "Syndig1": 0.47658570727862926, "Sdk2": 0.5754843209993976, "Inhba": 0.5573707770593411, "Ung": 0.37648548607052407, "C1ql1": 0.45542373331210023, "Cdca3": 0.3602560323409273, "Eya2": 0.3883086300041557, "Prr16": 0.5683668984772886, "Ecrg4": 0.44132481506388704, "Adamtsl3": 0.42054092275057453, "C230072F16Rik": 0.44035768516956303, "Thrsp": 0.4155441418742126, "Rxfp1": 0.6240221804139023, "Pld5": 0.5553541600028432, "Tshr": 0.5043465448651835, "Dpyd": 0.5524966823657984, "Hs3st3a1": 0.5407956207824076, "Arhgap6": 0.6681546547627619, "Lhx9": 0.5002222777070684, "Frem2": 0.4029510480653537, "Spp1": 0.45647547879447714, "Tbx3": 0.5259187289249586, "Il1rapl2": 0.5866192511792453, "Slc26a4": 0.5082066869300912, "Rerg": 0.4995460290897438, "Vsx2": 0.5240575116042114, "Nkx6-1": 0.43321876507477086, "Syt6": 0.49399626275179487, "Pde7b": 0.3940339865789737, "C1qb": 0.49808569515169127, "Ccn3": 0.39486349680524435, "Ccnb1": 0.41716710182767625, "Rassf4": 0.4078508199100276, "Cald1": 0.4120786894051296, "Cdc20": 0.2892699483129617, "Pxdc1": 0.465103371721937, "Irs4": 0.4340353472438493, "Nrsn2": 0.5233773416848638, "Dhrs3": 0.41004995877188727, "Bmp7": 0.433765401324692, "Cenpa": 0.3516385048643113, "Ecel1": 0.5690362100479178, "Cdh20": 0.4838685309825428, "Slc29a1": 0.31263116067104596, "Vav3": 0.5303280623082369, "Rnf112": 0.6973372023080179, "Adcy8": 0.5410342702753946, "Htra1": 0.40676756038425377, "Ndst4": 0.5618691981224037, "Cdca2": 0.4260236578707916, "Crb2": 0.45514950166112955, "Abtb2": 0.42722269053404077, "Pde5a": 0.43163493245399426, "Ankfn1": 0.5234013959930337, "Blank-0": 0.5530779266990867, "Blank-1": 0.48818181818181816, "Blank-2": 0.5150689596458369, "Blank-3": 0.49461422845691383, "Blank-4": 0.5159487010851693, "Blank-5": 0.5318611987381704, "Blank-6": 0.5356495965750041, "Blank-7": 0.5057731958762887, "Blank-8": 0.5048750564989991, "Blank-9": 0.49181222707423583, "Blank-10": 0.5270858046658758, "Blank-11": 0.49964336661911557, "Blank-12": 0.600313315926893, "Blank-13": 0.5152077151335311, "Blank-14": 0.5494472209601696, "Blank-15": 0.5550474850510024, "Blank-16": 0.6115002613695766, "Blank-17": 0.5384923817161187, "Blank-18": 0.5091336588894918, "Blank-19": 0.5967227867561589, "Blank-20": 0.5374621818828973, "Blank-21": 0.5300825369244135, "Blank-22": 0.5808510638297872, "Blank-23": 0.5211007820569573, "Blank-24": 0.4768117237065499, "Blank-25": 0.5441882804995197, "Blank-26": 0.5234454638124363, "Blank-27": 0.5395077720207254, "Blank-28": 0.44459124690338564, "Blank-29": 0.606006160164271, "Blank-30": 0.5, "Blank-31": 0.5796496323863121, "Blank-32": 0.43600729984924225, "Blank-33": 0.5472067951649787, "Blank-34": 0.6065969428801288, "Blank-35": 0.47430058555627846, "Blank-36": 0.5490312611434685, "Blank-37": 0.6006082108464268, "Blank-38": 0.5174903308981521, "Blank-39": 0.573404730031236, "Blank-40": 0.5163715335783495, "Blank-41": 0.4808715901530273, "Blank-42": 0.46273384143323765, "Blank-43": 0.6620696806304438, "Blank-44": 0.6359049718344355, "Blank-45": 0.5436551572465361, "Blank-46": 0.4877167630057804, "Blank-47": 0.5990485484264455, "Blank-48": 0.5487191764424227, "Blank-49": 0.5201342281879194 }, "sum_signals_medians": { "PolyT_raw": 17653067.0, "PolyT_high_pass": 170918.16328061704, "DAPI_raw": 5665347.0, "DAPI_high_pass": 84907.90875739872 } } }, { "region_id": 2, "metrics": { "num_cells": 266713, "volume_stats": { "min": 8.747866837718261, "pct_5": 13.317353427446616, "pct_25": 34.24315012793819, "pct_50": 87.8869329760052, "pct_75": 237.46886622552145, "pct_95": 1087.9390052355482, "max": 24174.2829813574, "mean": 240.03002826158416 }, "transcript_count_stats": { "min": 0.0, "pct_5": 0.0, "pct_25": 0.0, "pct_50": 0.0, "pct_75": 81.0, "pct_95": 1030.0, "max": 14826.0, "mean": 164.23418431047605 }, "ratio_covered": 0.2845371226827352, "ratio_transcripts_within_cell": 0.43250353193739904, "num_cells_with_no_transcripts": 144546, "enrichment": { "Neurod6": 0.3615649498131731, "Nr2f2": 0.32101734951974675, "Mef2c": 0.3868220809049859, "Nfib": 0.26768536859543934, "Nfix": 0.22967009583784753, "Zeb2": 0.3356301882697629, "Tcf7l2": 0.4032312595847854, "Id4": 0.4031266175435276, "Zic1": 0.1966985594851991, "Neurod2": 0.2534835320423053, "Sox5": 0.4558062733452737, "Tbr1": 0.4983317268480759, "Bhlhe22": 0.26212962736414575, "Nr2f1": 0.32526893853908073, "Foxg1": 0.5026242667489966, "Bcl11b": 0.42914145482475036, "Sox2": 0.39949350717380977, "Satb1": 0.39118444863301016, "Pou3f3": 0.42304859825112073, "Zic2": 0.23079672563146533, "Nr4a3": 0.44883624272651707, "Dlx1": 0.5371738060068931, "Etv5": 0.33512185132090927, "Arx": 0.4984703027745543, "Satb2": 0.3985843094295104, "Jun": 0.40669594749044835, "Tox": 0.5004824866620273, "Rxrg": 0.35421476118968104, "Tshz2": 0.35379884126417527, "Tfap2b": 0.3764848428180164, "Pbx3": 0.4295397154898948, "Nr4a2": 0.5217434528205419, "Isl1": 0.5408398476648627, "Tfap2d": 0.42996525462394275, "Zfhx3": 0.4404618706917575, "Zfp521": 0.3944270448739168, "Foxp2": 0.43336533064068794, "Nhlh2": 0.300698053034189, "Lhx2": 0.45042903882955737, "Zhx2": 0.39076017172280514, "Pax6": 0.2204730503699576, "Olig1": 0.28206954291867525, "Shox2": 0.41451119342889353, "Lhx6": 0.44552594201687695, "Tox3": 0.4116570609264901, "Zfhx4": 0.5271740105896078, "Prox1": 0.44216525410411406, "Meis1": 0.33476113164530724, "Gbx2": 0.5105930400748745, "En1": 0.47879168199424404, "Eomes": 0.32683811928053014, "Olig2": 0.4868170346776339, "Etv1": 0.321774051311273, "Fosl2": 0.41412690344111214, "Sall3": 0.4690051377417656, "Insm1": 0.16744491182032184, "Sp9": 0.5000772857253265, "Foxp4": 0.4127602068016415, "Zfp536": 0.41485531472775716, "Plagl1": 0.4424457999161471, "Irx2": 0.4714242982718527, "St18": 0.2498309932397296, "Sox21": 0.4018493773650583, "Tox2": 0.4734203164547594, "Rarb": 0.4853465728333173, "Ets1": 0.4462760298718124, "Otx2": 0.4763076046145649, "Sox6": 0.4847398015674866, "Lef1": 0.4818287245831508, "Zbtb16": 0.5248782615015626, "Irx1": 0.4357480035492458, "En2": 0.42115199543217097, "Nr3c2": 0.6161050437163571, "Sp8": 0.4926344218021115, "Tfap2a": 0.33669907566927837, "Bcl6": 0.5017412935323383, "Lhx1": 0.4137374211874546, "Nr2e1": 0.4106714628297362, "Hoxa5": 0.6730189701897019, "Uncx": 0.3511256130846108, "Pax3": 0.42290671175475997, "Gata3": 0.5020522990361113, "Dlx2": 0.5098303258820361, "Otp": 0.49925906088198535, "Six3": 0.46832619341513987, "Lhx5": 0.46524069129209317, "Ebf2": 0.5067447111956264, "Prdm13": 0.4449569495694957, "Irx5": 0.44415584415584414, "Onecut1": 0.5483485938521909, "Msx1": 0.3452609711763178, "Barhl1": 0.2612779314387022, "Sox10": 0.5108542725971269, "Sp5": 0.3882658692014668, "Gata2": 0.48283690328547707, "Neurog2": 0.3635605586825099, "Tal1": 0.44602254348204734, "Pou4f2": 0.43550553879357806, "Nkx2-2": 0.4649441231216882, "Tfap2c": 0.43481521887358515, "Nkx2-1": 0.5403644507787845, "Bnc2": 0.453765701953406, "Lmx1b": 0.42312582020997375, "Ikzf1": 0.4942643181690694, "Thrb": 0.46893592677345536, "Foxb1": 0.37886642977806256, "Prdm16": 0.5064486729818554, "Sim1": 0.5128809563899647, "Dmbx1": 0.3953628788793624, "Onecut3": 0.5988007736943907, "Fezf1": 0.4270218151138966, "Glis3": 0.4660638279083732, "Irx3": 0.43642813189995294, "Dbx2": 0.5120706819313091, "Pax7": 0.4509627983094312, "Nkx2-4": 0.5377229080932785, "Lmx1a": 0.4900380896571931, "Hoxc4": 0.5785714285714286, "Six6": 0.5211379952140388, "Nhlh1": 0.12059103908484271, "Prdm12": 0.4400105475960271, "Pax8": 0.6207605650593074, "Tlx3": 0.464720664991301, "Gbx1": 0.4781179726690884, "Pax2": 0.41593461755662925, "Atoh1": 0.1810740013097577, "Mkx": 0.5487740958592977, "Sox14": 0.5500680119999255, "Insm2": 0.47838870920317556, "Foxa1": 0.5111953773925605, "Pitx2": 0.43446636289021595, "Nr5a2": 0.5178272046496032, "Evx2": 0.430272857300033, "Hmx3": 0.4430304383418918, "Hoxc5": 0.5159179765419293, "Nkx6-2": 0.4055709954522486, "Runx2": 0.46383317645355154, "Barx2": 0.4685049019607843, "Foxd3": 0.5232412060301508, "Hmx2": 0.5188320663441603, "Prdm6": 0.4210437898980849, "Hoxb6": 0.4646979865771812, "Lhx8": 0.45261144974303813, "Lhx3": 0.4031982421875, "Lhx4": 0.4646557486631016, "Cux2": 0.45656868137464607, "Fezf2": 0.466580310880829, "Mafa": 0.4331549147613007, "Phox2b": 0.4475185703520293, "Rax": 0.562624584717608, "Tbx20": 0.47431672804807135, "Ascl1": 0.37505073299024305, "Slc18a3": 0.4665190107050572, "Slc6a3": 0.5563070285397779, "Slc6a4": 0.500674484992709, "Slc6a5": 0.47593150253944, "Slc32a1": 0.5109762355913469, "Slc17a6": 0.4996499899239524, "Slc17a7": 0.3399592355659597, "Slc17a8": 0.5249123741071032, "Slc6a2": 0.5157408702952287, "Cacng4": 0.38109222527024494, "Gja1": 0.3392789463955065, "Gabbr2": 0.43181448254977667, "Sst": 0.46147993039785296, "Nts": 0.5566469033502393, "Grin2b": 0.5612910892537204, "Cck": 0.45838690620982037, "Penk": 0.5586099911255215, "Kcnma1": 0.5521801369761634, "Cbln2": 0.49750332403852965, "Grik3": 0.5442304089497912, "Adgrg1": 0.42461732019291254, "Cnr1": 0.42641165274399917, "Adgrl3": 0.5387123229675412, "Cbln1": 0.2966494680248173, "Fxyd7": 0.3947671671972202, "Fzd1": 0.40964827143111016, "Cxcr4": 0.3356442480320398, "Gpr17": 0.6108637307653952, "Nxph4": 0.4666640314866368, "Slc24a2": 0.5626160522417643, "Igf1": 0.4290691727400588, "Kcnb2": 0.5198942187791787, "Sstr2": 0.32211108400422866, "Prokr2": 0.49917948326527495, "Chrm3": 0.533529185027763, "Lpar1": 0.2787283674690702, "Kcnj6": 0.43102991696382903, "Kcnc4": 0.4339365262058529, "Kcnj2": 0.5859786573010941, "Cacng5": 0.49416761759857997, "Htr7": 0.49235734729919006, "Grm1": 0.5295749081852337, "Npy1r": 0.5121759342034686, "Kcnn2": 0.5914635104761007, "Tacr3": 0.532931983095447, "Trpc4": 0.6176383336394072, "Kcnh5": 0.5978503319723987, "Ackr3": 0.48994544448251326, "Adcyap1": 0.5364345463575192, "Agt": 0.3507173721917731, "Grik4": 0.5897041917226742, "Grp": 0.5282574716107041, "Kcnh1": 0.5681968368650602, "Hcrtr2": 0.5281595257343035, "Nxph2": 0.5050672182006205, "Stmn3": 0.41831120109084124, "Crmp1": 0.4213578660710374, "Dcx": 0.3817862880564055, "Vim": 0.21459512941391667, "Slc1a3": 0.28162411242096114, "Ppp1r1b": 0.3689613746405038, "Islr2": 0.32072636875306526, "Fn1": 0.46233511392129073, "Prkcb": 0.4086978045848109, "Serpine2": 0.28551299853715406, "Olfm3": 0.5230906635298218, "Robo2": 0.4715801930401982, "Efnb2": 0.4101269695579012, "Shisa6": 0.5171842626205495, "Ntrk2": 0.41748076994642314, "Sparc": 0.2301640304902876, "Ephb1": 0.485127299258861, "Tnc": 0.40260580521642086, "Ccnd2": 0.24896916031694757, "Dtx1": 0.41677770982535545, "Nrp1": 0.569648532368605, "Aldoc": 0.28570564703068285, "Shtn1": 0.4748257879015508, "Ptprn2": 0.553919707988333, "Vstm2l": 0.44917314969049243, "Pla2g7": 0.3734796796202907, "Klhl13": 0.3781609370710429, "Fat4": 0.4786342815814851, "Pou3f2": 0.4751614493706375, "Fat1": 0.4789769443257757, "Zfp462": 0.47013812465321364, "Pcdh10": 0.4920282048043273, "Dusp4": 0.41708960044292703, "Sema3a": 0.4211411497378827, "Luzp2": 0.37687309781443856, "Calb2": 0.440118571035663, "H19": 0.15684312276113038, "Cdh4": 0.5030050417622366, "Dab1": 0.45818629531780275, "Lmo3": 0.42348705073995774, "Runx1t1": 0.44963340693060055, "Mpped2": 0.4402704917030461, "Mpped1": 0.421244459382812, "Hs6st2": 0.5058844004590867, "Gng4": 0.35713663091601805, "Gad2": 0.49315294431302376, "Nrgn": 0.30462908671441763, "Hs6st3": 0.4345583494519665, "Resp18": 0.4973160360101001, "Ptprt": 0.5067859548807939, "Nrp2": 0.5424921179420488, "Cldn5": 0.48601654017549367, "Ralyl": 0.46091552408989545, "Vat1l": 0.44106457681418565, "Sema3c": 0.4958976910617305, "Slc4a4": 0.3245361496736946, "Spon1": 0.5036249188679476, "Mdk": 0.28818243978543295, "Ptgds": 0.2672263774354166, "Gad1": 0.47089288166985027, "Nrcam": 0.49792349186148216, "Sla": 0.39559178050740446, "Cxxc5": 0.33790032908179723, "Dpy19l1": 0.48229047958440846, "Sez6l": 0.49965403707900424, "Nefm": 0.382141025986993, "Camk1": 0.4660505718492872, "Pde1a": 0.5032372910726381, "Abca1": 0.4380464732811178, "Cachd1": 0.5055562880725719, "Cd9": 0.34581879637621765, "Cdh8": 0.5363609668215602, "Pcdh11x": 0.3732553109627662, "Aldh1l1": 0.2669541823448263, "Igsf21": 0.4233662161804766, "Efna5": 0.4413823910933191, "Dkk3": 0.4201974956734195, "Nrn1": 0.42959716589230107, "Mki67": 0.2912305350661515, "Pdgfra": 0.5127684815184815, "Crym": 0.397377938517179, "Dach1": 0.41748108108108106, "Clstn2": 0.5331588132635253, "Pcdh8": 0.4833879766914, "Tbc1d30": 0.48413920836064844, "Lhfpl3": 0.4735822227178944, "Spock3": 0.4960662552011679, "Gda": 0.4265809974346301, "AI593442": 0.46021207237740513, "Prmt8": 0.41543054906588317, "Pcsk2": 0.533437609380469, "Nos1": 0.3984541011474713, "Pid1": 0.4157204042848904, "Ntng2": 0.37713391194805435, "Thsd7a": 0.5021935910697716, "Rgs10": 0.38021612028832247, "Nell1": 0.5848475557276874, "Tnr": 0.5866826775917685, "Unc5c": 0.393612333758167, "Tgfb2": 0.3951438477507146, "Rgs8": 0.40952361097719553, "Lamc1": 0.4280437365444914, "Cntnap4": 0.5848720426944573, "Tspan9": 0.36711709926689123, "Dok5": 0.45758888382880925, "Peg10": 0.48352778944873576, "St6galnac5": 0.5311494721580354, "Sox2ot": 0.5769009419314771, "Shisa9": 0.4887462338155859, "Spats2l": 0.4888508712440063, "Adamts3": 0.5274839447987171, "Cdh12": 0.5396707313128699, "Mab21l1": 0.36657753390524095, "Unc13c": 0.3807667152990894, "Gpc4": 0.37362341162880247, "Sulf1": 0.52152260111023, "Elmo1": 0.4252425716720266, "Brinp3": 0.5698529960896541, "Rprm": 0.40290842884153033, "Tspan18": 0.48206689032615085, "Ildr2": 0.45028558241504646, "Mlc1": 0.28401714789011656, "Tppp3": 0.40505913026588075, "Mir100hg": 0.7115331618592687, "Wnt7b": 0.3437162380210745, "Mdga1": 0.38754771431787716, "Cpne4": 0.4710287344157873, "B230209E15Rik": 0.4601692714402722, "Chd7": 0.3876881448597352, "Cadps2": 0.29621871515301695, "Dusp6": 0.4490202060826272, "Smoc1": 0.4529795496858273, "Ccna2": 0.2886393442622951, "Lifr": 0.46246364759663044, "Tafa2": 0.45112661222909123, "Tmem163": 0.5152170746313751, "Arhgap29": 0.386948312485249, "Hist1h1d": 0.5132963675455471, "Ntng1": 0.6272166136947698, "Tmem164": 0.39898130582025537, "Samd5": 0.5509827807592269, "Lrrtm3": 0.556464895296789, "Dscaml1": 0.6244725951858185, "Sfrp2": 0.456890905466592, "Pdzrn3": 0.33149501400779735, "Creg2": 0.4568516035667922, "Fam210b": 0.35386060452549817, "Gpc3": 0.428647601443222, "Dock4": 0.5599316738430804, "Plce1": 0.41587391834923454, "Cyb561": 0.47131874630396214, "Rftn1": 0.45866101165349304, "Sema5a": 0.5379967131600016, "Jam2": 0.3975013282243653, "Kirrel3": 0.5642195831557613, "Pcbd1": 0.3875033832115377, "Tafa1": 0.5321244864287794, "Egfr": 0.4211516598453843, "Fbln2": 0.4532592218292067, "Kcnk9": 0.4989830409271155, "Kif11": 0.3089914047810905, "Pmepa1": 0.48217506631299734, "Dio2": 0.40806154512948317, "Tmem132d": 0.5901061646890892, "Igsf11": 0.5997544505831799, "Sorcs3": 0.5857066257470803, "Mcm3": 0.25004546281142026, "Galnt17": 0.5795771798502933, "Slc2a13": 0.5165315407772304, "Tmem200a": 0.5299663586424221, "Myorg": 0.41348615090735436, "Phlda1": 0.45669008412940315, "9130024F11Rik": 0.43012390115594934, "Vstm2b": 0.5730077221590686, "Fam135b": 0.5685103615455109, "Tiam2": 0.4436135945306337, "Palmd": 0.5016106301590497, "Fhit": 0.4162129049823033, "Sdk1": 0.6089768530625522, "Ccdc80": 0.38120586876663515, "Cntn3": 0.6353442669195026, "Pde1c": 0.3515052266710336, "Cdh9": 0.6000554323725056, "Pclaf": 0.3197941783290661, "Lhfp": 0.37203136669156084, "Tmtc1": 0.5171076126046827, "Lpl": 0.44885189952998233, "Lmo1": 0.41686126097109266, "Dgkg": 0.529306592039801, "Slc43a2": 0.5858101853652465, "Fgfr1": 0.4705788830887897, "Asb4": 0.4805600414394101, "Nbl1": 0.3159993864089584, "Kctd8": 0.4869614856740311, "Iqgap2": 0.4643693942423926, "C1qa": 0.4574710430904482, "Zmat4": 0.4627298221089508, "Synpr": 0.4587790044626142, "Slco1c1": 0.5683553054349307, "Lypd6": 0.4815423026434326, "Dll1": 0.559108480885792, "Galnt14": 0.5842756639286898, "Rgs6": 0.4736249304396216, "Rspo3": 0.5402716361339229, "Mlf1": 0.4131220461495691, "Fam107a": 0.42554117263134994, "Angpt1": 0.46025387717541344, "Pdlim4": 0.3134024811877161, "Sncg": 0.42622373222599724, "Thbs1": 0.46829214957358406, "Prss12": 0.4940255192204802, "Inhbb": 0.46567562228368237, "Ptchd4": 0.5838950102714725, "Rprml": 0.4602529882789834, "C1qc": 0.4568735644322412, "C1ql3": 0.49505871783353655, "Cep112": 0.5735095069287786, "Utrn": 0.447039674059576, "Rai14": 0.38266121245106127, "Col25a1": 0.5993680575914525, "Hs3st2": 0.47152041753531704, "Naaa": 0.46087952431007706, "Gas2l3": 0.4186665247698611, "Laptm5": 0.4948025698404678, "Parm1": 0.5091808366199004, "Met": 0.4721978984238179, "Slit3": 0.5686164454957303, "Col18a1": 0.3828675525680313, "Ostf1": 0.34858434966683505, "Thsd7b": 0.6470449472862871, "Cenpf": 0.24162313755200235, "Gpc6": 0.5568758886857608, "Ptpru": 0.6004547599639625, "Cspg4": 0.6055668071171947, "Slitrk6": 0.5874942258430269, "Hmmr": 0.37724839400428267, "Mgat4c": 0.5570600219401348, "Fibcd1": 0.414588256889154, "Syndig1": 0.46920583826709056, "Sdk2": 0.5738445955722761, "Inhba": 0.549427210709229, "Ung": 0.33695838491572233, "C1ql1": 0.44051387839300665, "Cdca3": 0.31352689624127844, "Eya2": 0.39403477991640434, "Prr16": 0.5625480476102113, "Ecrg4": 0.4210332556141858, "Adamtsl3": 0.4295772528960433, "C230072F16Rik": 0.41331020749020364, "Thrsp": 0.3743872137532738, "Rxfp1": 0.6457487226516442, "Pld5": 0.5425248054707846, "Tshr": 0.5035268583830711, "Dpyd": 0.5342852893053697, "Hs3st3a1": 0.5648029330889093, "Arhgap6": 0.6716863190794147, "Lhx9": 0.4744183943926034, "Frem2": 0.3277502939414779, "Spp1": 0.4127855235835064, "Tbx3": 0.5038027799632835, "Il1rapl2": 0.5687037534025994, "Slc26a4": 0.47164982281139256, "Rerg": 0.4843713435629994, "Vsx2": 0.517113385949832, "Nkx6-1": 0.4452688016229532, "Syt6": 0.4643839936677159, "Pde7b": 0.38199788630714043, "C1qb": 0.4529941242655332, "Ccn3": 0.41725093049424394, "Ccnb1": 0.350342589253516, "Rassf4": 0.3748614072494669, "Cald1": 0.3634092040618865, "Cdc20": 0.25761505303260657, "Pxdc1": 0.4417045726598037, "Irs4": 0.42756613756613754, "Nrsn2": 0.5148793042140055, "Dhrs3": 0.3466104209946157, "Bmp7": 0.43604286050710417, "Cenpa": 0.3222890597355808, "Ecel1": 0.5810676527603564, "Cdh20": 0.467996589721729, "Slc29a1": 0.2913454469068375, "Vav3": 0.5348587055606199, "Rnf112": 0.6991276387600387, "Adcy8": 0.5451142585380396, "Htra1": 0.3893146651671479, "Ndst4": 0.5687637194983104, "Cdca2": 0.3755497482312448, "Crb2": 0.4451564266867697, "Abtb2": 0.4133142281129985, "Pde5a": 0.37917827958212463, "Ankfn1": 0.5171351767550555, "Blank-0": 0.5376066679896805, "Blank-1": 0.46393390530664125, "Blank-2": 0.5117155938594129, "Blank-3": 0.46014038606166957, "Blank-4": 0.501004016064257, "Blank-5": 0.5369199338457048, "Blank-6": 0.5216201423097975, "Blank-7": 0.5056765308021589, "Blank-8": 0.5020792624881006, "Blank-9": 0.48219104155423637, "Blank-10": 0.5102, "Blank-11": 0.4603409933283914, "Blank-12": 0.5928469721082168, "Blank-13": 0.5066935078007045, "Blank-14": 0.5496340347666971, "Blank-15": 0.5416137229987293, "Blank-16": 0.5704980037823072, "Blank-17": 0.5089219330855018, "Blank-18": 0.4850310675955564, "Blank-19": 0.5859165132353386, "Blank-20": 0.526755607682158, "Blank-21": 0.5315795573067563, "Blank-22": 0.5823766518699933, "Blank-23": 0.4993646759847522, "Blank-24": 0.45550035486160395, "Blank-25": 0.541070834718989, "Blank-26": 0.523836389280677, "Blank-27": 0.5344619105199516, "Blank-28": 0.427166630646207, "Blank-29": 0.614441416893733, "Blank-30": 0.47919224996588894, "Blank-31": 0.5447199265381083, "Blank-32": 0.4094164362192441, "Blank-33": 0.5427811044577512, "Blank-34": 0.5936511176890885, "Blank-35": 0.42342508775170884, "Blank-36": 0.5123823942900401, "Blank-37": 0.6056028014007003, "Blank-38": 0.511474609375, "Blank-39": 0.5549555826511061, "Blank-40": 0.47361332190522837, "Blank-41": 0.47553956834532374, "Blank-42": 0.43913843323624097, "Blank-43": 0.6410263553797292, "Blank-44": 0.6363132747039679, "Blank-45": 0.5266127515516269, "Blank-46": 0.4547891786497685, "Blank-47": 0.589250645994832, "Blank-48": 0.5417457305502846, "Blank-49": 0.5265438786565547 }, "sum_signals_medians": { "PolyT_raw": 18530800.0, "PolyT_high_pass": 268254.7488097669, "DAPI_raw": 5790963.0, "DAPI_high_pass": 89446.32893312129 } } } ] }